# genemark-et

## Summary

+ **Module Name:** genemark
+ **Support Level:** Secondary Support
+ **Software Access Level:** RESTRICTED - Contact Helpdesk
+ **Home Page:** [http://exon.gatech.edu/GeneMark/](http://exon.gatech.edu/GeneMark/)

## Software Description

GeneMark is the name of a set of gene prediction programs developed at
the Georgia Institute of Technology. Genemark-ET is a member of this set
of software for semi-supervised analysis of novel genomes. To use this
program at MSI, please send a a request to
[help@msi.umn.edu](mailto:help@msi.umn.edu?subject=software%20access%3A%20genemark)
and ask to be added to the GeneMark group. The use of GeneMark at MSI is
limited to academic researchers.
## General Linux

To load this module for use in a Linux environment, you can run the command:

	module load genemark

Depending on where you are working, there may be more than one version of genemark available.
To see which modules are available for loading you can run:

	module avail genemark
## Licensing Info

If you encounter the error: `gmes_petap.pl: Command not found` or something similar, you are probably not part of the GeneMark group. Please contact help@msi.umn.edu with a request to be added.