# transdecoder

## Summary

+ **Module Name:** transdecoder
+ **Support Level:** Secondary Support
+ **Software Access Level:** Open Access
+ **Home Page:** [http://transdecoder.github.io/](http://transdecoder.github.io/)

## Software Description

TransDecoder is software for identifying candidate coding regions within
transcript sequences, including those from de novo RNA-Seq transcript
assembly via Trinity, or from RNA-Seq alignments to the genome using
Tophat and Cufflinks.
## General Linux

To load this module for use in a Linux environment, you can run the command:

	module load transdecoder

Depending on where you are working, there may be more than one version of transdecoder available.
To see which modules are available for loading you can run:

	module avail transdecoder