amos

Summary

• Module Name: amos

• Support Level: Secondary Support

• Software Access Level: Open Access

• Home Page: https://amos.sourceforge.net/wiki/index.php/AMOS

Software Description

AMOS is collection of tools and class interfaces for the assembly of DNA sequencing reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contiging, and assembly manipulation. AMOS is composed of a number of modules, each of which performs a step in the assembly process. While each module can be run individually, AMOS provides a module that controls the entire pipeline assembly, called runAmos.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load amos

Depending on where you are working, there may be more than one version of amos available. To see which modules are available for loading you can run:

module avail amos