blat

Summary

Module Name: blat
Support Level: Secondary Support
Software Access Level: Open Access
Home Page: http://genome.ucsc.edu/cgi-bin/hgBlat?command=start

Software Description

BLAT, the BLAST-like alignment tool, is a DNA/Protein Sequence Analysis program. It is designed to quickly find sequences of 95% and greater similarity of length 40 bases or more.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load blat

Depending on where you are working, there may be more than one version of blat available. To see which modules are available for loading you can run:

module avail blat