freebayes

Summary

• Module Name: freebayes

• Support Level: Primary Support

• Software Access Level: Open Access

• Home Page: https://github.com/ekg/freebayes

Software Description

From the FreeBayes Git repository : FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load freebayes

Depending on where you are working, there may be more than one version of freebayes available. To see which modules are available for loading you can run:

module avail freebayes