trinotate

Summary

• Module Name: trinotate

• Support Level: Primary Support

• Software Access Level: Open Access

• Home Page: https://trinotate.github.io

Software Description

Trinotate is a transcriptome annotation suite designed for use with de novo assembled transcriptomes from model or non model organisms.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load trinotate

Depending on where you are working, there may be more than one version of trinotate available. To see which modules are available for loading you can run:

module avail trinotate

Licensing Info

Please note that several of the dependencies of Trinotate are restricted-access software, for use by academic researchers only. In order to use trinotate, contact help@msi.umn.edu and request access to SignalP4, TMHMM, and RNAmmer. Documentation on the use of Trinotate can be found on the software’s webpage .