Getting Started
Get Started with MSI
MyMSI Overview
Working with External Collaborators
MSI Terminology
MSI Support Staff
Connecting
Connecting to MSI Systems
SSH Keys
Connecting to Compute
Compute
Compute Need to Know
MSI Environment Aliases and Variables
Interactive HPC
Slurm Job Submission and Scheduling
Open OnDemand Support
Private Partitions
Job Sizing and Efficiency
Storage
File Storage
Reducing Tier 1 Footprint at MSI
Transfer Between Your Local Computer and Tier 1 with FileZilla
Managing Tier 1 User Data
Scratch
BeeOND on Agate
Tier 2 Data Management
Transferring Data To and From MSI
Software
Software Modules
Available Software
Conda Best Practices
Best Practices for Managing R Libraries
Galaxy at MSI
R package installation references
License Reservations
MSI User Docs
Index
Index