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Getting Started

  • Get Started with MSI
  • MyMSI Overview
  • Working with External Collaborators
  • MSI Terminology
  • MSI Support Staff

Connecting

  • Connecting to MSI Systems
  • SSH Keys
  • Connecting to Compute

Compute

  • Compute Need to Know
  • MSI Environment Aliases and Variables
  • Interactive HPC
  • Slurm Job Submission and Scheduling
  • Open OnDemand Support
  • Private Partitions
  • Job Sizing and Efficiency

Storage

  • File Storage
  • Reducing Tier 1 Footprint at MSI
  • Transfer Between Your Local Computer and Tier 1 with FileZilla
  • Managing Tier 1 User Data
  • Scratch
  • BeeOND on Agate
  • Tier 2 Data Management
  • Transferring Data To and From MSI

Software

  • Software Modules
  • Available Software
  • Conda Best Practices
  • Best Practices for Managing R Libraries
  • Galaxy at MSI
  • R package installation references
  • License Reservations
MSI User Docs
  • Search

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